Raynor 2024 - Pathways: N_GLYCAN_BIOSYNTHESIS

Select pathway
 
 
 
 
Genes in pathway N_GLYCAN_BIOSYNTHESIS
 
 
 
 
Depletion pathways
Info
These plots depict the score of all pathways in negative selection against the the raw p-value (using permutation). The selected pathway is highlighted.
si IEL Teff D7.5
 
 
 
 
si IEL Trm D30
 
 
 
 
spleen Tcirc D30
 
 
 
 
spleen Tcm D30
 
 
 
 
spleen Teff D7.5
 
 
 
 
spleen Tem D30
 
 
 
 
Enrichment pathways
Info
These plots depict the score of all pathways in negative selection against the the raw p-value (using permutation). The selected pathway is highlighted.
si IEL Teff D7.5
 
 
 
 
si IEL Trm D30
 
 
 
 
spleen Tcirc D30
 
 
 
 
spleen Tcm D30
 
 
 
 
spleen Teff D7.5
 
 
 
 
spleen Tem D30
 
 
 
 
Gene rank
Info
These plots show the rank of the gene for all genes in the pathway. The gene were ranked by the LFC vs the input for the depicted celltype.
si IEL Teff D7.5
 
 
 
 
si IEL Trm D30
 
 
 
 
spleen Tcirc D30
 
 
 
 
spleen Tcm D30
 
 
 
 
spleen Teff D7.5
 
 
 
 
spleen Tem D30
 
 
 
 
Heatmap

This heatmap shows the average LFC of all genes in the pathway against the input for all celltypes.

Click on any cell for further information.

 
 
 
 
Copyright © 2025 Reina Lab, La Jolla Institute for Immunology, La Jolla, CA 92037